Browse of TCMCG042C54180 protein

CDS

Accession Number	TCMCG042C54180
gbkey	CDS
Protein Id	XP_016486316.1
Location	join(40069..40386,41151..41282,41692..41919,42006..42053,42136..42343,42949..43139,43285..43677)
Gene	LOC107806636
GeneID	107806636
Organism	Nicotiana tabacum

Protein

Length	505aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA319578
db_source	XM_016630830.1
Definition	PREDICTED: polygalacturonase At1g48100-like [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category	G
Description	Glycosyl hydrolases family 28
KEGG_TC	-
KEGG_Module	M00081        [VIEW IN KEGG]
KEGG_Reaction	R01982        [VIEW IN KEGG] R07413        [VIEW IN KEGG]
KEGG_rclass	RC00049        [VIEW IN KEGG]
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG]
KEGG_ko	ko:K01213        [VIEW IN KEGG]
EC	3.2.1.67        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00040        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] map00040        [VIEW IN KEGG] map01100        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004553        [VIEW IN EMBL-EBI] GO:0004650        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005618        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009664        [VIEW IN EMBL-EBI] GO:0009825        [VIEW IN EMBL-EBI] GO:0009827        [VIEW IN EMBL-EBI] GO:0009831        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016049        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016798        [VIEW IN EMBL-EBI] GO:0030312        [VIEW IN EMBL-EBI] GO:0040007        [VIEW IN EMBL-EBI] GO:0042545        [VIEW IN EMBL-EBI] GO:0042547        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045229        [VIEW IN EMBL-EBI] GO:0071554        [VIEW IN EMBL-EBI] GO:0071555        [VIEW IN EMBL-EBI] GO:0071669        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGGAGGATTTAGTTTTAGGAACTTCACATTTATGTTCATAGTAGCATTTCTTGTTTGGTCATCAAATGTAGAGACTTGTTATGCAAGAAGAGGCAGGCATTGGAGACAAACAACAACTTCCTCTGCTTCTTTGTACAAGAAGAAAGGAAAGTCTCACCATCATAATAATGGGAGCAAGTCGAAGCCAAAACACTCGTCTCCGCCAAGTATGCCAACAAACCCGCCAAGAAAAGGCTACGACGATGTGCCTTCGTCCACCATCTTCGACGTAAGAAGTTTCGGTGCCACTGGAGATGGCAAGACTGATGACACTAAGGCATTTCAAGCTGCATGGGCAGCTGCTTGTAAAGTGGAAGCTTCGACGTTTGTCGTTCCGTCACAATATGTATTCCTTGTCGGACCAATTTCATTCTCAGGTCCATACTGTCAGCACAACATTGTTTTTCAGCTTGACGGAACAATAATTGCTCCAGTAGATGCCAAATCTTGGGGTTCAGGTCTTATGCAATGGCTTGAATTTACCAAATTGGTTGGGATTACAGTTAAAGGAAGCGGGGTAATTGATGGGAGAGGTTCAGTTTGGTGGCAAGATACCCCATATGATGATCCTCTAGATGATGAACTAAAACTAATCATCCCATTAAACAAGACATCATTGAGATATCCTCCAATTCCTCTAAATAGCTCACTTGGTGGTGGAAAAATGCCAAGCATTAAGCCAACGGCACTTCGATTCTATGGGAGTTTTAATGTTACTGTAACAGGCATCACAATTCAGAATAGTCAACAATGCCATCTCAAATTTGACAACTGCATAGGGGTAACAGTATACAATTTCACTGTCTCATCTCCTGGTGATAGTCCTAATACAGATGGAATCCATTTACAGAACTCCAAAGACGTGCTAATCCGCAGTTCCAACATTGCGTGTGGAGATGACTGTGTCTCCATACAAACTGGATGCACCAATGTGTATGTACACAACATAAATTGTGGACCAGGACATGGAATCAGCATTGGAAGTCTGGGGAAAGACAACACAAAGGCTTGTGTTTCAAACATTACGGTCAAAGATGTTGTTATGCAAAACACAATGAATGGTGTCAGGATTAAGACATGGCAGGGAGGGTCAGGGTCAGTACAAGGAGTGTTTTTCTCGAACATTCAAGTTTCAGAAGTCCAACTACCAATTGTAATTGATCAATTCTATTGCGACAAGAGCAAATGTAAGAACCAGACATCTGCAGTGGCTTTATCAGGAATCAACTTTGAAAGAATTAGAGGAACATATACAGTAAAACCAGTGCATCTAGCATGCAGTGACAGTATGCCATGTCAAGACGTGACCTTGACGGATATCCAACTAAAGCCAATACAAGAGCGTTACCACATGTATGATCCATATTGTTGGCAGACATTCGGAGAGTTGTATACTCCTACTCTACCTCCAATTGATTGTTTACAAGTCGGTAAACCATCGAGCAACAGAATTCAGGGAGATCATGATCAATGCTAG

Protein:   MGGFSFRNFTFMFIVAFLVWSSNVETCYARRGRHWRQTTTSSASLYKKKGKSHHHNNGSKSKPKHSSPPSMPTNPPRKGYDDVPSSTIFDVRSFGATGDGKTDDTKAFQAAWAAACKVEASTFVVPSQYVFLVGPISFSGPYCQHNIVFQLDGTIIAPVDAKSWGSGLMQWLEFTKLVGITVKGSGVIDGRGSVWWQDTPYDDPLDDELKLIIPLNKTSLRYPPIPLNSSLGGGKMPSIKPTALRFYGSFNVTVTGITIQNSQQCHLKFDNCIGVTVYNFTVSSPGDSPNTDGIHLQNSKDVLIRSSNIACGDDCVSIQTGCTNVYVHNINCGPGHGISIGSLGKDNTKACVSNITVKDVVMQNTMNGVRIKTWQGGSGSVQGVFFSNIQVSEVQLPIVIDQFYCDKSKCKNQTSAVALSGINFERIRGTYTVKPVHLACSDSMPCQDVTLTDIQLKPIQERYHMYDPYCWQTFGELYTPTLPPIDCLQVGKPSSNRIQGDHDQC